Number of Reads | 66,601,887 |
Valid Barcodes | 97.4% |
Sequencing Saturation | 70.8% |
Q30 Bases in Barcode | 94.1% |
Q30 Bases in RNA Read | 90.2% |
Q30 Bases in Sample Index | 91.1% |
Q30 Bases in UMI | 92.7% |
Reads Mapped to Genome | 95.4% |
Reads Mapped Confidently to Genome | 92.4% |
Reads Mapped Confidently to Intergenic Regions | 4.8% |
Reads Mapped Confidently to Intronic Regions | 31.1% |
Reads Mapped Confidently to Exonic Regions | 56.5% |
Reads Mapped Confidently to Transcriptome | 53.7% |
Reads Mapped Antisense to Gene | 1.0% |
Estimated Number of Cells | 1,222 |
Fraction Reads in Cells | 94.9% |
Mean Reads per Cell | 54,502 |
Median Genes per Cell | 1,919 |
Total Genes Detected | 18,391 |
Median UMI Counts per Cell | 6,628 |
Name | pbmc_1k_v3 |
Description | Peripheral blood mononuclear cells (PBMCs) from a healthy donor |
Transcriptome | GRCh38 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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