Number of Reads | 84,512,390 |
Valid Barcodes | 97.0% |
Sequencing Saturation | 66.0% |
Q30 Bases in Barcode | 97.4% |
Q30 Bases in RNA Read | 95.3% |
Q30 Bases in Sample Index | 92.1% |
Q30 Bases in UMI | 97.3% |
Reads Mapped to Genome | 95.3% |
Reads Mapped Confidently to Genome | 89.5% |
Reads Mapped Confidently to Intergenic Regions | 5.0% |
Reads Mapped Confidently to Intronic Regions | 22.7% |
Reads Mapped Confidently to Exonic Regions | 61.8% |
Reads Mapped Confidently to Transcriptome | 59.2% |
Reads Mapped Antisense to Gene | 1.1% |
Estimated Number of Cells | 1,011 |
Fraction Reads in Cells | 89.4% |
Mean Reads per Cell | 83,592 |
Median Genes per Cell | 2,058 |
Total Genes Detected | 19,436 |
Median UMI Counts per Cell | 7,610 |
Name | heart_1k_v3 |
Description | Cells from the whole heart of an E18 mouse |
Transcriptome | mm10 |
Chemistry | Single Cell 3' v3 |
Cell Ranger Version | 3.0.0 |
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