Number of Reads | 76,921,082 |
Valid Barcodes | 96.6% |
Sequencing Saturation | 90.1% |
Q30 Bases in Barcode | 94.0% |
Q30 Bases in RNA Read | 88.3% |
Q30 Bases in Sample Index | 90.1% |
Q30 Bases in UMI | 92.8% |
Reads Mapped to Genome | 92.7% |
Reads Mapped Confidently to Genome | 90.1% |
Reads Mapped Confidently to Intergenic Regions | 3.6% |
Reads Mapped Confidently to Intronic Regions | 22.3% |
Reads Mapped Confidently to Exonic Regions | 64.1% |
Reads Mapped Confidently to Transcriptome | 60.8% |
Reads Mapped Antisense to Gene | 1.0% |
Estimated Number of Cells | 996 |
Fraction Reads in Cells | 96.1% |
Mean Reads per Cell | 77,230 |
Median Genes per Cell | 1,078 |
Total Genes Detected | 16,063 |
Median UMI Counts per Cell | 3,358 |
Name | pbmc_1k_v2 |
Description | Peripheral blood mononuclear cells (PBMCs) from a healthy donor |
Transcriptome | GRCh38 |
Chemistry | Single Cell 3' v2 |
Cell Ranger Version | 3.0.0 |
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