Estimated Number of Cells

1,063

Mean Reads per Cell

74,047

Sequencing

Number of Reads	78,712,670
Valid Barcodes	98.0%
Sequencing Saturation	26.0%
Q30 Bases in Barcode	96.8%
Q30 Bases in RNA Read	95.5%
Q30 Bases in Sample Index	93.5%
Q30 Bases in UMI	96.8%

Reads Mapped to Genome: Fraction of reads that mapped to the genome.
hg19 Reads Mapped to Genome: Fraction of reads that mapped to the hg19 genome.
mm10 Reads Mapped to Genome: Fraction of reads that mapped to the mm10 genome.
Reads Mapped Confidently to Genome: Fraction of reads that mapped uniquely to the genome. If a gene mapped to exonic loci from a single gene and also to non-exonic loci, it is considered uniquely mapped to one of the exonic loci.
hg19 Reads Mapped Confidently to Genome: Fraction of reads that mapped uniquely to the hg19 genome. If a gene mapped to exonic loci from a single gene and also to non-exonic loci, it is considered uniquely mapped to one of the exonic loci.
mm10 Reads Mapped Confidently to Genome: Fraction of reads that mapped uniquely to the mm10 genome. If a gene mapped to exonic loci from a single gene and also to non-exonic loci, it is considered uniquely mapped to one of the exonic loci.
Reads Mapped Confidently to Intergenic Regions: Fraction of reads that mapped uniquely to an intergenic region of the genome.
hg19 Reads Mapped Confidently to Intergenic Regions: Fraction of reads that mapped uniquely to an intergenic region of the hg19 genome.
mm10 Reads Mapped Confidently to Intergenic Regions: Fraction of reads that mapped uniquely to an intergenic region of the mm10 genome.
Reads Mapped Confidently to Intronic Regions: Fraction of reads that mapped uniquely to an intronic region of the genome.
hg19 Reads Mapped Confidently to Intronic Regions: Fraction of reads that mapped uniquely to an intronic region of the hg19 genome.
mm10 Reads Mapped Confidently to Intronic Regions: Fraction of reads that mapped uniquely to an intronic region of the mm10 genome.
Reads Mapped Confidently to Exonic Regions: Fraction of reads that mapped uniquely to an exonic region of the genome.
hg19 Reads Mapped Confidently to Exonic Regions: Fraction of reads that mapped uniquely to an exonic region of the hg19 genome.
mm10 Reads Mapped Confidently to Exonic Regions: Fraction of reads that mapped uniquely to an exonic region of the mm10 genome.
Reads Mapped Confidently to Transcriptome: Fraction of reads that mapped to a unique gene in the transcriptome. The read must be consistent with annotated splice junctions. These reads are considered for UMI counting.
hg19 Reads Mapped Confidently to Transcriptome: Fraction of reads that mapped to a unique gene in the hg19 transcriptome. The read must be consistent with annotated splice junctions. These reads are considered for UMI counting.
mm10 Reads Mapped Confidently to Transcriptome: Fraction of reads that mapped to a unique gene in the mm10 transcriptome. The read must be consistent with annotated splice junctions. These reads are considered for UMI counting.
Reads Mapped Antisense to Gene: Fraction of reads confidently mapped to the transcriptome, but on the opposite strand of their annotated gene. A read is counted as antisense if it has any alignments that are consistent with an exon of a transcript but antisense to it, and has no sense alignments.

Mapping

Reads Mapped to Genome	97.3%
hg19 Reads Mapped to Genome	59.5%
mm10 Reads Mapped to Genome	38.1%
Reads Mapped Confidently to Genome	87.6%
hg19 Reads Mapped Confidently to Genome	55.5%
mm10 Reads Mapped Confidently to Genome	32.1%
Reads Mapped Confidently to Intergenic Regions	2.9%
hg19 Reads Mapped Confidently to Intergenic Regions	1.8%
mm10 Reads Mapped Confidently to Intergenic Regions	1.1%
Reads Mapped Confidently to Intronic Regions	21.0%
hg19 Reads Mapped Confidently to Intronic Regions	14.0%
mm10 Reads Mapped Confidently to Intronic Regions	7.1%
Reads Mapped Confidently to Exonic Regions	63.7%
hg19 Reads Mapped Confidently to Exonic Regions	39.7%
mm10 Reads Mapped Confidently to Exonic Regions	24.0%
Reads Mapped Confidently to Transcriptome	60.2%
hg19 Reads Mapped Confidently to Transcriptome	37.5%
mm10 Reads Mapped Confidently to Transcriptome	22.7%
Reads Mapped Antisense to Gene	1.1%

GEM Partitions

GEMs with >0 Cells	1,063
GEMs with >1 Cell	4
Fraction GEMs with >1 Cell	0.4%
Fraction GEMs with >1 Cell (Lower Bound)	0.0%
Fraction GEMs with >1 Cell (Upper Bound)	1.0%
Mean UMI Count Purity	99.6%

Cells

Estimated Number of Cells	1,063
hg19 Estimated Number of Cell Partitions	469
mm10 Estimated Number of Cell Partitions	596
Fraction Reads in Cells	88.2%
hg19 Fraction Reads in Cells	85.5%
mm10 Fraction Reads in Cells	90.7%
Mean Reads per Cell	74,047
hg19 Median Genes per Cell	6,765
mm10 Median Genes per Cell	4,742
hg19 Total Genes Detected	22,553
mm10 Total Genes Detected	19,146
hg19 Median UMI Counts per Cell	40,990
mm10 Median UMI Counts per Cell	20,170

Sample

Name	1k_hgmm_v3
Description	1:1 mixture of fresh frozen human (HEK293T) and mouse (NIH3T3) cells
Transcriptome	hg19_and_mm10
Chemistry	Single Cell 3' v3
Cell Ranger Version	3.0.2

Each point represents a cell-barcode. The axes measure the total UMI counts in each cell-barcode that mapped to each transcriptome reference. The points are colored by the number of inferred cells in the GEM associated with each barcode. A multiplet represents either a GEM inferred to have encapsulated >1 cell or a barcode sequence that was shared by multiple single-cell GEMs.

Cell UMI Counts

Shown here are the total UMI counts for each cell-barcode. Cells with greater UMI counts likely have higher RNA content than cells with fewer UMI counts. The axes correspond to the 2-dimensional embedding produced by the t-SNE algorithm. In this space, pairs of cells that are close to each other have more similar gene expression profiles than cells that are distant from each other. The display is limited to a random subset of 10000 cells.

t-SNE Projection of Cells Colored by UMI Counts

These are the assignments of each cell-barcode a clusters by an automated clustering algorithm. The clustering groups together cells that have similar expression profiles. The axes correspond to the 2-dimensional embedding produced by the t-SNE algorithm. In this space, pairs of cells that are close to each other have more similar gene expression profiles than cells that are distant from each other. The display is limited to a random subset of 10000 cells and K-means up to K=20. Please use Loupe(tm) Cell Browser to view the entire dataset.

t-SNE projection of Cells Colored by Automated Clustering

The differential expression analysis seeks to find, for each cluster, genes that are more highly expressed in that cluster relative to the rest of the sample. Here a differential expression test was performed between each cluster and the rest of the sample for each gene. The Log2 fold-change (L2FC) is an estimate of the log2 ratio of expression in a cluster to that in all other cells. A value of 1.0 indicates 2-fold greater expression in the cluster of interest. The p-value is a measure of the statistical significance of the expression difference and is based on a negative binomial test. The p-value reported here has been adjusted for multiple testing via the Benjamini-Hochberg procedure. In this table you can click on a column to sort by that value. Also, in this table genes were filtered by (Mean UMI counts > 1.0) and the top N genes by L2FC for each cluster were retained. Genes with L2FC < 0 or adjusted p-value >= 0.10 were grayed out. The number of top genes shown per cluster, N, is set to limit the number of table entries shown to 10000; N=10000/K^2 where K is the number of clusters. N can range from 1 to 50. For the full table, please refer to the "differential_expression.csv" files produced by the pipeline.

Top Genes By Cluster (Log2 fold-change, p-value)

Gene ID	Gene name	L2FC	p-value	L2FC	p-value	L2FC	p-value	L2FC	p-value	L2FC	p-value
		Cluster 1		Cluster 2		Cluster 3		Cluster 4		Cluster 5
hg19_ENSG00000197061	hg19_HIST1H4C	5.78	1e-129	-9.40	1e-86	-5.26	6e-39	-8.68	6e-30	-2.25	2e-03
hg19_ENSG00000136897	hg19_MRPL50	5.50	9e-101	-6.54	2e-44	-5.37	6e-31	-5.56	2e-15	-1.96	3e-03
hg19_ENSG00000103187	hg19_COTL1	5.48	2e-83	-8.10	1e-40	-7.67	9e-31	-6.54	3e-14	-1.34	1e-01
hg19_ENSG00000101843	hg19_PSMD10	5.44	5e-102	-6.19	2e-44	-6.76	2e-35	-5.63	7e-16	-1.66	1e-02
hg19_ENSG00000092010	hg19_PSME1	5.35	2e-96	-7.04	1e-44	-6.03	4e-32	-6.48	3e-16	-1.43	3e-02
hg19_ENSG00000135900	hg19_MRPL44	5.30	5e-86	-7.71	1e-40	-4.94	1e-25	-6.14	3e-14	-1.53	3e-02
hg19_ENSG00000196636	hg19_ACN9	5.28	3e-95	-6.45	6e-43	-5.61	7e-31	-5.48	6e-15	-1.59	2e-02
hg19_ENSG00000243927	hg19_MRPS6	5.26	2e-110	-7.58	3e-54	-5.15	2e-34	-7.02	1e-19	-1.52	2e-02
hg19_ENSG00000103005	hg19_USB1	5.25	3e-88	-6.81	1e-40	-4.79	5e-26	-6.25	8e-15	-1.64	2e-02
hg19_ENSG00000086189	hg19_DIMT1	5.23	2e-77	-7.64	4e-37	-6.20	1e-26	-5.07	9e-12	-1.27	1e-01
hg19_ENSG00000079459	hg19_FDFT1	5.22	2e-99	-6.21	8e-45	-5.78	3e-33	-6.65	3e-17	-1.46	3e-02
hg19_ENSG00000184281	hg19_TSSC4	5.22	3e-94	-7.04	2e-44	-6.02	5e-32	-6.48	4e-16	-1.28	6e-02
hg19_ENSG00000134333	hg19_LDHA	5.20	5e-140	-7.02	3e-81	-5.79	2e-52	-6.52	4e-28	-1.50	2e-02
hg19_ENSG00000158710	hg19_TAGLN2	5.18	3e-120	-8.47	5e-70	-6.29	4e-46	-6.17	6e-22	-1.29	6e-02
hg19_ENSG00000108518	hg19_PFN1	5.18	3e-147	-7.75	3e-95	-5.41	4e-52	-7.59	6e-34	-1.46	2e-02
hg19_ENSG00000143256	hg19_PFDN2	5.16	9e-132	-7.32	3e-73	-6.30	5e-51	-5.59	2e-22	-1.38	3e-02
hg19_ENSG00000110104	hg19_CCDC86	5.16	2e-88	-8.10	2e-44	-6.67	4e-32	-4.95	3e-13	-1.21	1e-01
hg19_ENSG00000205352	hg19_PRR13	5.15	1e-100	-7.48	3e-50	-6.05	3e-35	-5.92	6e-17	-1.25	7e-02
hg19_ENSG00000154719	hg19_MRPL39	5.15	5e-98	-6.85	3e-47	-6.41	2e-35	-6.87	9e-18	-1.20	9e-02
hg19_ENSG00000203760	hg19_CENPW	5.15	7e-130	-6.54	6e-67	-5.99	3e-48	-7.57	1e-26	-1.39	3e-02
hg19_ENSG00000065978	hg19_YBX1	5.14	4e-147	-7.58	2e-97	-5.57	9e-55	-7.30	3e-34	-1.39	3e-02
hg19_ENSG00000175334	hg19_BANF1	5.14	4e-133	-7.46	7e-76	-6.33	2e-52	-7.32	2e-27	-1.25	6e-02
hg19_ENSG00000143179	hg19_UCK2	5.13	6e-101	-6.74	5e-48	-5.30	1e-32	-6.77	5e-18	-1.37	4e-02
hg19_ENSG00000197958	hg19_RPL12	5.13	1e-151	-7.89	3e-106	-5.58	3e-56	-6.95	3e-34	-1.38	3e-02
hg19_ENSG00000205302	hg19_SNX2	5.13	8e-113	-8.76	2e-59	-4.74	9e-34	-6.20	1e-19	-1.49	2e-02
hg19_ENSG00000175581	hg19_MRPL48	5.12	4e-92	-6.48	8e-43	-5.63	1e-30	-5.50	7e-15	-1.37	5e-02
hg19_ENSG00000214194	hg19_LINC00998	5.11	1e-68	-6.99	4e-34	-7.56	5e-27	-6.43	2e-12	-1.04	3e-01
hg19_ENSG00000169714	hg19_CNBP	5.11	4e-126	-7.35	4e-69	-5.33	7e-43	-5.37	7e-21	-1.50	2e-02
hg19_ENSG00000118939	hg19_UCHL3	5.10	3e-124	-8.00	1e-68	-5.57	2e-43	-6.44	5e-23	-1.29	4e-02
hg19_ENSG00000125821	hg19_DTD1	5.10	2e-106	-7.55	1e-53	-5.30	9e-35	-6.99	2e-19	-1.27	5e-02
hg19_ENSG00000101444	hg19_AHCY	5.09	2e-125	-7.38	7e-68	-5.95	4e-46	-6.14	9e-23	-1.27	5e-02
hg19_ENSG00000187514	hg19_PTMA	5.09	7e-149	-7.50	1e-101	-5.89	2e-59	-7.38	9e-36	-1.28	3e-02
hg19_ENSG00000112306	hg19_RPS12	5.09	3e-149	-7.49	4e-102	-5.03	1e-49	-6.84	7e-34	-1.50	2e-02
hg19_ENSG00000174444	hg19_RPL4	5.08	7e-146	-7.70	1e-98	-5.73	1e-56	-7.09	2e-33	-1.29	4e-02
hg19_ENSG00000140350	hg19_ANP32A	5.08	5e-119	-7.44	4e-67	-7.01	1e-49	-7.47	9e-25	-1.10	1e-01
hg19_ENSG00000105700	hg19_KXD1	5.06	3e-107	-7.97	2e-57	-6.22	1e-39	-5.09	7e-17	-1.21	8e-02
hg19_ENSG00000116649	hg19_SRM	5.06	5e-125	-7.40	8e-75	-6.42	7e-52	-6.29	1e-24	-1.20	9e-02
hg19_ENSG00000232119	hg19_MCTS1	5.06	1e-113	-7.09	2e-61	-5.24	2e-38	-5.79	4e-20	-1.42	3e-02
hg19_ENSG00000179958	hg19_DCTPP1	5.06	2e-121	-7.93	7e-72	-5.82	2e-45	-6.37	2e-23	-1.22	8e-02
hg19_ENSG00000147224	hg19_PRPS1	5.06	1e-105	-6.88	3e-53	-5.86	1e-37	-6.32	5e-19	-1.22	8e-02
hg19_ENSG00000107833	hg19_NPM3	5.05	3e-110	-7.35	5e-57	-6.18	2e-40	-5.79	6e-19	-1.17	8e-02
hg19_ENSG00000185088	hg19_RPS27L	5.05	2e-132	-6.95	6e-76	-7.26	4e-59	-6.30	5e-26	-1.16	9e-02
hg19_ENSG00000115541	hg19_HSPE1	5.05	5e-132	-7.56	1e-84	-5.69	1e-50	-6.91	6e-29	-1.26	6e-02
hg19_ENSG00000187837	hg19_HIST1H1C	5.04	1e-86	-6.49	2e-42	-5.74	2e-30	-5.93	4e-15	-1.27	1e-01
hg19_ENSG00000172354	hg19_GNB2	5.04	4e-123	-7.74	6e-69	-6.99	3e-50	-5.86	6e-22	-1.10	1e-01
hg19_ENSG00000069482	hg19_GAL	5.04	1e-104	-8.95	5e-58	-6.93	5e-41	-6.39	4e-19	-0.99	2e-01
hg19_ENSG00000105887	hg19_MTPN	5.03	3e-101	-9.41	6e-60	-5.80	4e-37	-7.84	4e-21	-1.08	2e-01
hg19_ENSG00000175063	hg19_UBE2C	5.03	2e-104	-6.73	5e-58	-6.08	2e-41	-6.44	9e-21	-1.25	1e-01
hg19_ENSG00000101150	hg19_TPD52L2	5.02	2e-66	-7.59	2e-33	-6.15	8e-24	-6.02	1e-11	-0.96	4e-01
hg19_ENSG00000118680	hg19_MYL12B	5.02	6e-116	-7.49	2e-63	-5.25	3e-39	-5.93	9e-21	-1.32	5e-02
hg19_ENSG00000204764	hg19_RANBP17	2.03	3e-12	-6.66	3e-18	-6.23	8e-14	-5.10	2e-06	2.10	7e-05
hg19_ENSG00000160298	hg19_C21orf58	2.03	6e-16	-6.81	2e-27	-6.37	2e-20	-6.25	6e-10	2.09	6e-06
hg19_ENSG00000189283	hg19_FHIT	1.97	1e-11	-5.86	7e-18	-4.84	2e-12	-5.30	1e-06	2.11	7e-05
hg19_ENSG00000184351	hg19_KRTAP19-1	1.96	2e-06	-6.86	5e-12	-4.84	2e-07	-3.71	6e-03	2.09	6e-03
hg19_ENSG00000188206	hg19_HNRNPU-AS1	1.95	4e-12	-5.91	2e-20	-4.25	2e-12	-5.94	8e-08	2.08	7e-05
hg19_ENSG00000225210	hg19_AL589743.1	1.94	1e-15	-5.20	3e-22	-5.19	2e-17	-4.64	5e-08	2.10	2e-06
hg19_ENSG00000229807	hg19_XIST	1.93	2e-17	-7.92	4e-61	-4.63	1e-24	-7.44	1e-20	2.12	2e-06
hg19_ENSG00000105576	hg19_TNPO2	1.92	8e-11	-6.72	5e-18	-4.28	9e-11	-5.16	3e-06	2.15	6e-05
hg19_ENSG00000182871	hg19_COL18A1	1.92	6e-15	-7.39	9e-27	-5.37	9e-18	-4.82	3e-08	2.17	1e-06
hg19_ENSG00000009413	hg19_REV3L	1.91	4e-12	-6.83	2e-20	-3.57	2e-10	-5.27	5e-07	2.10	3e-05
hg19_ENSG00000111215	hg19_PRR4	1.89	4e-15	-5.97	2e-23	-6.54	8e-19	-5.41	1e-08	2.23	2e-07
hg19_ENSG00000105429	hg19_MEGF8	1.87	5e-17	-6.88	7e-27	-5.44	7e-19	-5.31	3e-09	2.25	5e-09
hg19_ENSG00000203930	hg19_LINC00632	1.86	5e-11	-7.31	1e-21	-4.29	4e-12	-4.75	1e-06	2.19	2e-05
hg19_ENSG00000198563	hg19_DDX39B	1.86	6e-14	-7.52	3e-27	-4.07	2e-14	-5.95	2e-09	2.19	1e-06
hg19_ENSG00000221978	hg19_CCNL2	1.86	2e-14	-6.42	8e-26	-5.40	3e-18	-4.86	2e-08	2.23	3e-07
hg19_ENSG00000168255	hg19_POLR2J3	1.85	5e-21	-8.46	2e-54	-5.56	3e-33	-6.90	2e-18	2.25	7e-10
hg19_ENSG00000266967	hg19_AARSD1	1.83	2e-08	-6.75	7e-16	-4.73	5e-10	-5.19	2e-05	2.26	1e-04
hg19_ENSG00000223705	hg19_NSUN5P1	1.83	8e-14	-4.07	2e-16	-4.38	1e-13	-4.85	2e-07	2.15	5e-07
hg19_ENSG00000131584	hg19_ACAP3	1.81	1e-09	-6.48	1e-16	-5.04	1e-11	-4.91	9e-06	2.30	1e-05
hg19_ENSG00000177302	hg19_TOP3A	1.78	2e-10	-6.44	3e-21	-4.00	1e-11	-5.88	1e-07	2.25	1e-05
hg19_ENSG00000144395	hg19_CCDC150	1.78	1e-06	-6.21	5e-12	-4.18	3e-07	-4.65	4e-04	2.30	5e-04
hg19_ENSG00000158805	hg19_ZNF276	1.74	2e-07	-5.42	6e-13	-4.40	9e-09	-4.86	8e-05	2.32	1e-04
hg19_ENSG00000128191	hg19_DGCR8	1.73	2e-08	-8.16	6e-23	-4.39	1e-11	-6.60	9e-08	2.34	3e-05
hg19_ENSG00000215154	hg19_AC141586.5	1.72	4e-10	-6.73	2e-19	-6.29	7e-15	-5.17	9e-07	2.41	6e-07
hg19_ENSG00000228253	hg19_MT-ATP8	1.71	1e-16	-5.98	1e-31	-6.14	1e-24	-5.01	7e-11	2.38	5e-11
hg19_ENSG00000109065	hg19_NAT9	1.68	4e-09	-5.89	8e-18	-4.87	2e-12	-3.74	5e-05	2.37	4e-06
hg19_ENSG00000253203	hg19_GUSBP3	1.67	2e-09	-6.76	2e-19	-5.33	2e-13	-5.20	1e-06	2.45	6e-07
hg19_ENSG00000198886	hg19_MT-ND4	1.64	2e-21	-8.73	2e-117	-5.92	4e-57	-5.37	2e-24	2.45	5e-14
hg19_ENSG00000270069	hg19_RP6-99M1.2	1.63	3e-13	-7.18	5e-34	-4.74	2e-20	-6.62	2e-12	2.45	1e-09
hg19_ENSG00000168679	hg19_SLC16A4	1.61	1e-10	-6.21	4e-19	-4.77	4e-13	-4.65	1e-06	2.50	2e-09
hg19_ENSG00000161996	hg19_WDR90	1.59	2e-05	-5.05	3e-10	-4.62	1e-07	-4.49	7e-04	2.49	1e-04
hg19_ENSG00000168096	hg19_ANKS3	1.59	8e-06	-6.31	9e-13	-5.88	1e-09	-4.75	3e-04	2.55	4e-05
hg19_ENSG00000198763	hg19_MT-ND2	1.57	2e-19	-8.35	9e-101	-5.59	6e-51	-5.30	4e-23	2.52	1e-14
hg19_ENSG00000198786	hg19_MT-ND5	1.53	4e-18	-8.47	6e-99	-6.16	3e-55	-5.38	9e-23	2.57	6e-15
hg19_ENSG00000174501	hg19_ANKRD36C	1.44	4e-06	-6.71	4e-16	-6.28	2e-12	-3.56	4e-04	2.66	1e-06
hg19_ENSG00000198727	hg19_MT-CYB	1.44	8e-17	-9.01	7e-119	-5.81	8e-55	-5.32	1e-23	2.65	1e-16
hg19_ENSG00000212907	hg19_MT-ND4L	1.44	1e-15	-7.99	1e-63	-5.30	2e-37	-4.96	5e-17	2.64	3e-15
hg19_ENSG00000211459	hg19_MT-RNR1	1.38	5e-15	-9.02	1e-112	-5.29	5e-47	-5.50	8e-24	2.71	4e-17
hg19_ENSG00000198840	hg19_MT-ND3	1.34	2e-14	-8.76	3e-108	-6.04	2e-55	-5.09	1e-21	2.75	8e-18
hg19_ENSG00000210082	hg19_MT-RNR2	1.33	2e-14	-9.11	1e-119	-5.57	1e-52	-5.34	2e-23	2.76	3e-18
hg19_ENSG00000198804	hg19_MT-CO1	1.31	6e-14	-9.23	7e-119	-6.27	2e-58	-5.09	8e-22	2.78	2e-18
hg19_ENSG00000198712	hg19_MT-CO2	1.29	2e-13	-8.72	2e-113	-6.09	5e-58	-4.95	4e-22	2.80	1e-18
hg19_ENSG00000198938	hg19_MT-CO3	1.29	2e-13	-8.91	8e-116	-6.36	1e-60	-4.93	5e-22	2.81	1e-18
hg19_ENSG00000146830	hg19_GIGYF1	1.27	2e-04	-4.28	1e-09	-3.85	4e-07	-4.32	4e-04	2.74	2e-06
hg19_ENSG00000248527	hg19_MTATP6P1	1.27	7e-13	-8.85	5e-97	-6.17	1e-53	-4.86	1e-19	2.83	9e-19
hg19_ENSG00000198888	hg19_MT-ND1	1.26	8e-13	-9.08	7e-112	-5.70	2e-51	-5.01	5e-21	2.83	6e-19
hg19_ENSG00000198899	hg19_MT-ATP6	1.22	3e-12	-8.60	2e-110	-6.20	2e-57	-5.00	3e-21	2.87	1e-19
hg19_ENSG00000104899	hg19_AMH	1.15	2e-04	-4.61	3e-12	-4.17	5e-09	-4.64	4e-05	2.89	2e-08
hg19_ENSG00000270641	hg19_TSIX	0.78	3e-03	-5.01	7e-18	-4.26	2e-12	-3.45	3e-05	3.24	6e-14
hg19_ENSG00000198695	hg19_MT-ND6	0.76	7e-05	-8.79	2e-70	-6.59	6e-45	-4.46	2e-14	3.34	1e-23
mm10_ENSMUSG00000098178	mm10_Gm42418	-3.81	9e-92	1.25	3e-10	1.43	2e-11	1.98	3e-13	-0.74	5e-01
mm10_ENSMUSG00000023764	mm10_Sfi1	-6.06	7e-85	1.33	5e-09	1.92	5e-16	2.01	3e-11	-3.39	5e-04
mm10_ENSMUSG00000034488	mm10_Edil3	-6.07	4e-81	1.72	2e-14	1.50	1e-09	2.05	2e-11	-4.24	1e-04
mm10_ENSMUSG00000036800	mm10_Fam135b	-6.18	1e-75	1.05	4e-05	2.95	2e-33	0.61	2e-01	-4.35	2e-04
mm10_ENSMUSG00000019817	mm10_Plagl1	-6.36	4e-118	0.73	1e-03	2.66	2e-36	1.72	5e-09	-5.44	3e-07
mm10_ENSMUSG00000064357	mm10_mt-Atp6	-6.38	1e-129	1.44	1e-11	1.85	2e-16	1.96	3e-11	-4.60	6e-07
mm10_ENSMUSG00000019518	mm10_Ap4m1	-6.45	2e-89	1.61	3e-13	1.65	3e-12	2.03	1e-11	-4.42	5e-05
mm10_ENSMUSG00000022032	mm10_Scara5	-6.46	2e-80	0.20	6e-01	2.97	4e-37	1.87	6e-09	-4.21	2e-04
mm10_ENSMUSG00000006800	mm10_Sulf2	-6.49	6e-127	0.89	3e-05	2.36	1e-29	1.99	8e-13	-5.56	8e-08
mm10_ENSMUSG00000046743	mm10_Fat4	-6.55	5e-86	1.02	1e-05	2.69	2e-32	1.27	2e-04	-3.29	8e-04
mm10_ENSMUSG00000020034	mm10_Tcp11l2	-6.55	3e-79	0.74	5e-03	2.49	2e-24	1.99	1e-09	-4.30	2e-04
mm10_ENSMUSG00000029641	mm10_Rasl11a	-6.56	3e-139	0.82	2e-04	2.81	3e-41	1.36	8e-06	-6.24	4e-09
mm10_ENSMUSG00000038388	mm10_Mpp6	-6.60	7e-79	3.20	3e-46	0.88	1e-03	0.21	8e-01	-3.08	2e-03
mm10_ENSMUSG00000032449	mm10_Slc25a36	-6.62	5e-89	1.67	4e-14	1.65	4e-12	1.97	8e-11	-4.36	6e-05
mm10_ENSMUSG00000047793	mm10_Sned1	-6.62	9e-170	0.45	4e-02	2.75	6e-43	1.90	1e-11	-6.24	6e-11
mm10_ENSMUSG00000097296	mm10_Gm26532	-6.64	3e-54	1.03	1e-03	1.85	1e-08	2.49	7e-10	-4.12	5e-03
mm10_ENSMUSG00000027868	mm10_Tbx15	-6.65	5e-95	1.33	8e-09	2.02	2e-17	1.93	7e-10	-4.81	2e-05
mm10_ENSMUSG00000040945	mm10_Rcc2	-6.65	1e-90	2.87	9e-42	0.88	8e-04	1.00	4e-03	-3.40	4e-04
mm10_ENSMUSG00000013846	mm10_St3gal1	-6.67	3e-111	0.91	6e-05	2.66	8e-35	1.52	8e-07	-5.15	1e-06
mm10_ENSMUSG00000037894	mm10_H2afz	-6.68	5e-161	3.30	9e-66	0.51	4e-02	0.66	5e-02	-7.17	3e-11
mm10_ENSMUSG00000032238	mm10_Rora	-6.69	2e-92	0.96	8e-05	2.65	5e-29	1.44	2e-05	-3.85	2e-04
mm10_ENSMUSG00000041120	mm10_Nbl1	-6.71	4e-129	0.68	2e-03	2.90	2e-44	1.40	4e-06	-4.68	6e-07
mm10_ENSMUSG00000002020	mm10_Ltbp2	-6.73	9e-65	0.93	2e-03	2.62	1e-20	1.54	1e-04	-2.62	2e-02
mm10_ENSMUSG00000064339	mm10_mt-Rnr2	-6.75	3e-241	1.31	4e-11	1.83	2e-18	2.16	9e-16	-4.01	8e-09
mm10_ENSMUSG00000026576	mm10_Atp1b1	-6.78	5e-153	0.79	2e-04	2.76	1e-42	1.51	3e-07	-6.47	6e-10
mm10_ENSMUSG00000002732	mm10_Fkbp7	-6.78	5e-127	1.04	4e-07	2.65	1e-39	1.34	5e-06	-5.27	2e-07
mm10_ENSMUSG00000035373	mm10_Ccl7	-6.79	3e-93	2.89	5e-31	0.81	8e-03	1.07	7e-03	-5.86	8e-06
mm10_ENSMUSG00000024754	mm10_Tmem2	-6.83	2e-98	1.38	3e-10	1.90	6e-17	2.04	2e-12	-4.58	2e-05
mm10_ENSMUSG00000022330	mm10_Osr2	-6.84	4e-87	0.96	7e-05	2.61	9e-30	1.56	2e-06	-4.32	1e-04
mm10_ENSMUSG00000015568	mm10_Lpl	-6.84	4e-144	0.74	9e-04	2.82	3e-41	1.48	1e-06	-6.33	3e-09
mm10_ENSMUSG00000067367	mm10_Lyar	-6.85	2e-92	3.06	2e-42	1.02	1e-04	0.28	6e-01	-3.81	2e-04
mm10_ENSMUSG00000029177	mm10_Cenpa	-6.85	2e-33	5.30	3e-34	-1.31	9e-02	-1.17	5e-01	-4.01	1e-01
mm10_ENSMUSG00000021281	mm10_Tnfaip2	-6.85	6e-95	0.83	7e-04	2.78	8e-33	1.43	2e-05	-3.82	2e-04
mm10_ENSMUSG00000037278	mm10_Tmem97	-6.89	5e-80	3.11	2e-40	0.76	9e-03	0.72	8e-02	-4.37	2e-04
mm10_ENSMUSG00000028565	mm10_Nfia	-6.89	1e-112	0.55	2e-02	2.93	2e-43	1.56	2e-07	-5.05	2e-06
mm10_ENSMUSG00000036446	mm10_Lum	-6.90	8e-182	1.07	1e-07	2.62	6e-39	1.34	4e-06	-6.38	2e-11
mm10_ENSMUSG00000021806	mm10_Nid2	-6.91	2e-123	1.06	4e-07	2.20	2e-25	2.02	2e-13	-4.24	3e-06
mm10_ENSMUSG00000028370	mm10_Pappa	-6.91	3e-129	0.84	1e-04	2.63	1e-34	1.67	3e-08	-5.77	8e-08
mm10_ENSMUSG00000017002	mm10_Slpi	-6.93	4e-57	0.86	1e-02	3.04	7e-20	0.88	9e-02	-4.89	3e-03
mm10_ENSMUSG00000022687	mm10_Boc	-6.95	5e-104	0.87	1e-04	2.70	4e-36	1.54	5e-07	-4.69	8e-06
mm10_ENSMUSG00000019942	mm10_Cdk1	-6.95	8e-58	3.81	1e-39	0.17	7e-01	0.12	1e+00	-4.11	5e-03
mm10_ENSMUSG00000020642	mm10_Rnf144a	-6.96	5e-82	1.02	3e-05	2.72	2e-31	1.29	2e-04	-4.12	2e-04
mm10_ENSMUSG00000025223	mm10_Ldb1	-6.98	3e-116	1.18	4e-08	2.00	9e-20	2.16	1e-14	-5.13	1e-06
mm10_ENSMUSG00000029657	mm10_Hsph1	-6.99	4e-83	3.24	2e-48	0.62	3e-02	0.69	9e-02	-4.15	2e-04
mm10_ENSMUSG00000100009	mm10_Gm7967	-7.00	6e-115	0.87	1e-04	2.43	4e-29	1.94	2e-11	-5.16	1e-06
mm10_ENSMUSG00000055897	mm10_Ppp4r1l-ps	-7.01	1e-113	0.97	8e-06	2.31	4e-27	1.99	2e-12	-3.97	2e-05
mm10_ENSMUSG00000032855	mm10_Pkd1	-7.02	1e-130	1.51	3e-14	1.83	4e-18	1.97	4e-13	-5.34	1e-07
mm10_ENSMUSG00000053113	mm10_Socs3	-7.05	2e-191	0.79	1e-04	2.78	2e-45	1.49	2e-07	-6.49	4e-12
mm10_ENSMUSG00000037465	mm10_Klf10	-7.05	6e-101	1.39	6e-10	1.83	6e-15	2.13	6e-13	-4.79	1e-05
mm10_ENSMUSG00000023067	mm10_Cdkn1a	-7.06	2e-76	1.83	1e-12	1.40	1e-06	2.08	4e-09	-4.54	4e-04
mm10_ENSMUSG00000035385	mm10_Ccl2	-7.07	3e-71	4.34	9e-44	-0.73	2e-01	0.17	8e-01	-5.48	9e-04
mm10_ENSMUSG00000056758	mm10_Hmga2	-7.08	3e-109	3.41	9e-56	0.33	3e-01	0.73	5e-02	-4.41	2e-05
mm10_ENSMUSG00000097206	mm10_Gm26699	-7.10	5e-82	1.45	2e-09	1.81	6e-13	2.10	5e-11	-4.25	2e-04
mm10_ENSMUSG00000024587	mm10_Nars	-7.10	2e-107	2.90	7e-46	0.89	3e-04	0.95	4e-03	-3.84	4e-05
mm10_ENSMUSG00000026069	mm10_Il1rl1	-7.10	3e-97	4.20	5e-66	-0.39	4e-01	0.03	1e+00	-4.13	2e-04
mm10_ENSMUSG00000062248	mm10_Cks2	-7.14	8e-64	4.45	2e-60	-0.41	4e-01	-0.41	8e-01	-3.88	2e-03
mm10_ENSMUSG00000097324	mm10_Carmn	-7.18	5e-104	1.35	2e-09	1.89	6e-16	2.11	2e-12	-4.92	8e-06
mm10_ENSMUSG00000024620	mm10_Pdgfrb	-7.20	1e-128	1.48	1e-12	1.80	3e-16	2.05	4e-13	-5.52	2e-07
mm10_ENSMUSG00000019961	mm10_Tmpo	-7.22	3e-114	3.17	1e-56	0.90	2e-04	0.34	4e-01	-4.96	2e-06
mm10_ENSMUSG00000005481	mm10_Ddx39	-7.24	1e-105	3.03	2e-46	0.90	5e-04	0.69	6e-02	-4.98	6e-06
mm10_ENSMUSG00000001403	mm10_Ube2c	-7.25	6e-22	5.96	1e-23	-2.70	2e-02	-1.03	1e+00	-2.99	1e+00
mm10_ENSMUSG00000025784	mm10_Clec3b	-7.26	5e-156	-0.25	4e-01	3.34	4e-61	1.75	9e-10	-4.74	6e-08
mm10_ENSMUSG00000062901	mm10_Klhl24	-7.27	3e-129	1.21	2e-09	2.09	8e-24	2.00	2e-13	-3.64	1e-05
mm10_ENSMUSG00000001056	mm10_Nhp2	-7.27	4e-118	2.92	2e-40	0.95	3e-04	0.82	3e-02	-5.88	5e-07
mm10_ENSMUSG00000025068	mm10_Gsto1	-7.34	2e-129	3.00	3e-52	0.82	7e-04	0.88	7e-03	-5.50	2e-07
mm10_ENSMUSG00000003032	mm10_Klf4	-7.36	3e-177	1.03	4e-07	2.71	8e-43	1.27	1e-05	-6.83	3e-11
mm10_ENSMUSG00000028716	mm10_Pdzk1ip1	-7.36	5e-109	0.66	4e-03	3.04	7e-46	1.25	9e-05	-4.84	6e-06
mm10_ENSMUSG00000025289	mm10_Prdx4	-7.37	5e-260	1.08	1e-08	2.22	1e-31	1.98	7e-15	-6.64	3e-16
mm10_ENSMUSG00000036570	mm10_Fxyd1	-7.37	1e-122	0.69	3e-03	2.86	5e-41	1.53	5e-07	-5.34	6e-07
mm10_ENSMUSG00000031451	mm10_Gas6	-7.38	4e-137	0.90	3e-05	2.74	8e-40	1.43	2e-06	-5.70	5e-08
mm10_ENSMUSG00000000031	mm10_H19	-7.38	2e-116	0.73	6e-03	2.77	1e-28	1.58	9e-06	-3.86	1e-04
mm10_ENSMUSG00000022037	mm10_Clu	-7.39	9e-82	0.70	7e-03	3.08	7e-39	1.14	2e-03	-4.13	3e-04
mm10_ENSMUSG00000029484	mm10_Anxa3	-7.41	2e-61	2.98	3e-26	0.87	1e-02	0.90	6e-02	-4.15	3e-03
mm10_ENSMUSG00000017493	mm10_Igfbp4	-7.42	1e-84	0.89	2e-03	2.66	2e-22	1.58	4e-05	-5.16	9e-05
mm10_ENSMUSG00000071708	mm10_Sms	-7.43	1e-167	1.13	2e-08	2.22	3e-27	1.93	2e-12	-4.91	1e-08
mm10_ENSMUSG00000064356	mm10_mt-Atp8	-7.43	3e-125	1.69	8e-14	1.65	1e-11	1.94	9e-10	-4.05	2e-05
mm10_ENSMUSG00000034614	mm10_Pik3ip1	-7.46	6e-87	1.00	3e-05	2.28	2e-22	2.04	4e-11	-4.20	1e-04
mm10_ENSMUSG00000026043	mm10_Col3a1	-7.46	7e-275	1.28	4e-12	2.07	4e-27	1.94	4e-14	-6.89	1e-17
mm10_ENSMUSG00000018819	mm10_Lsp1	-7.48	1e-102	1.13	4e-07	2.12	5e-21	2.09	6e-13	-4.64	2e-05
mm10_ENSMUSG00000023832	mm10_Acat2	-7.53	1e-145	2.91	4e-52	1.03	6e-06	0.71	3e-02	-5.85	1e-08
mm10_ENSMUSG00000027797	mm10_Dclk1	-7.58	5e-118	2.95	2e-43	0.88	7e-04	0.89	1e-02	-5.54	9e-07
mm10_ENSMUSG00000056481	mm10_Cd248	-7.59	2e-227	0.82	2e-05	2.69	2e-47	1.60	1e-09	-5.11	2e-11
mm10_ENSMUSG00000019929	mm10_Dcn	-7.61	4e-311	0.91	2e-06	2.62	4e-45	1.62	1e-09	-6.85	2e-19
mm10_ENSMUSG00000078190	mm10_Dnm3os	-7.61	6e-170	1.34	2e-11	1.99	7e-22	1.99	2e-13	-5.47	3e-09
mm10_ENSMUSG00000026456	mm10_Cyb5r1	-7.63	2e-94	3.15	2e-49	0.67	2e-02	0.86	2e-02	-4.37	6e-05
mm10_ENSMUSG00000042436	mm10_Mfap4	-7.64	6e-125	0.48	5e-02	2.64	1e-32	2.10	1e-12	-5.60	4e-07
mm10_ENSMUSG00000027750	mm10_Postn	-7.67	4e-254	0.47	3e-02	2.73	9e-46	1.97	9e-14	-6.03	5e-14
mm10_ENSMUSG00000023905	mm10_Tnfrsf12a	-7.72	2e-159	2.96	5e-55	0.95	3e-05	0.75	2e-02	-5.20	2e-08
mm10_ENSMUSG00000021559	mm10_Dapk1	-7.76	3e-75	0.57	4e-02	3.12	3e-37	1.28	5e-04	-3.91	9e-04
mm10_ENSMUSG00000028010	mm10_Gar1	-7.80	2e-101	3.07	3e-49	0.96	1e-04	0.53	2e-01	-4.53	3e-05
mm10_ENSMUSG00000033307	mm10_Mif	-7.80	8e-118	3.52	1e-52	0.37	2e-01	0.51	2e-01	-6.12	6e-07
mm10_ENSMUSG00000068122	mm10_Agtr2	-7.81	6e-75	-0.25	6e-01	3.57	3e-39	1.45	3e-04	-3.54	3e-03
mm10_ENSMUSG00000032826	mm10_Ank2	-7.82	9e-102	0.92	7e-05	2.27	5e-24	2.16	1e-13	-4.56	2e-05
mm10_ENSMUSG00000024236	mm10_Svil	-7.84	2e-184	0.99	3e-07	2.64	5e-45	1.47	7e-08	-5.45	6e-10
mm10_ENSMUSG00000048706	mm10_Lurap1l	-7.85	2e-89	3.83	2e-60	0.16	7e-01	0.17	9e-01	-4.58	9e-05
mm10_ENSMUSG00000021701	mm10_Plk2	-7.86	3e-75	3.23	6e-35	0.76	2e-02	0.53	3e-01	-4.59	5e-04
mm10_ENSMUSG00000028517	mm10_Plpp3	-7.87	3e-289	0.62	2e-03	2.75	1e-49	1.79	7e-12	-6.96	9e-18
mm10_ENSMUSG00000022548	mm10_Apod	-7.89	1e-82	0.74	4e-03	2.82	5e-33	1.57	3e-06	-4.04	3e-04
mm10_ENSMUSG00000027751	mm10_Supt20	-7.92	1e-125	1.28	4e-10	2.03	8e-22	2.03	2e-13	-5.07	8e-07
mm10_ENSMUSG00000025364	mm10_Pa2g4	-7.92	3e-153	2.90	2e-53	1.08	1e-06	0.66	4e-02	-5.88	8e-09
mm10_ENSMUSG00000064363	mm10_mt-Nd4	-7.93	1e-292	1.62	8e-17	1.66	4e-15	2.04	5e-14	-8.86	3e-22
mm10_ENSMUSG00000019846	mm10_Lama4	-7.95	2e-203	0.58	5e-03	2.81	1e-49	1.74	1e-10	-5.52	9e-11
mm10_ENSMUSG00000090386	mm10_Mir99ahg	-7.96	7e-82	0.70	8e-03	2.75	4e-30	1.73	3e-07	-4.11	3e-04
mm10_ENSMUSG00000005360	mm10_Slc1a3	-7.98	5e-215	1.22	1e-10	2.11	2e-27	1.99	1e-14	-7.30	2e-13
mm10_ENSMUSG00000023868	mm10_Pde10a	-7.98	1e-113	1.40	2e-09	1.82	9e-14	2.14	9e-12	-4.45	2e-05
mm10_ENSMUSG00000024190	mm10_Dusp1	-7.99	6e-155	1.02	1e-06	2.68	2e-38	1.36	6e-06	-4.56	2e-07
mm10_ENSMUSG00000027996	mm10_Sfrp2	-8.01	3e-107	0.52	8e-02	3.02	2e-29	1.49	1e-04	-6.33	3e-06
mm10_ENSMUSG00000029752	mm10_Asns	-8.02	1e-102	3.83	2e-69	0.09	9e-01	0.29	6e-01	-4.75	2e-05
mm10_ENSMUSG00000052310	mm10_Slc39a1	-8.04	2e-67	1.42	6e-07	1.84	6e-10	2.13	2e-08	-4.19	2e-03
mm10_ENSMUSG00000046668	mm10_Cxxc5	-8.06	4e-89	0.77	2e-03	2.67	5e-31	1.77	3e-08	-4.20	1e-04
mm10_ENSMUSG00000075602	mm10_Ly6a	-8.06	8e-87	0.32	3e-01	3.35	4e-35	1.19	3e-03	-5.21	1e-04
mm10_ENSMUSG00000029675	mm10_Eln	-8.06	4e-76	0.03	1e+00	3.17	1e-34	1.83	4e-07	-4.21	7e-04
mm10_ENSMUSG00000064370	mm10_mt-Cytb	-8.08	4e-299	1.59	5e-16	1.69	1e-15	2.05	5e-14	-8.47	1e-21
mm10_ENSMUSG00000064345	mm10_mt-Nd2	-8.11	3e-291	1.65	6e-17	1.62	5e-14	2.05	1e-13	-8.74	2e-21
mm10_ENSMUSG00000064341	mm10_mt-Nd1	-8.12	4e-314	1.80	1e-21	1.54	2e-13	1.95	3e-13	-8.66	1e-22
mm10_ENSMUSG00000029208	mm10_Guf1	-8.12	7e-92	1.22	1e-07	2.16	3e-20	1.96	2e-10	-4.27	9e-05
mm10_ENSMUSG00000057098	mm10_Ebf1	-8.12	9e-228	0.91	4e-06	2.41	1e-35	1.95	1e-13	-5.15	6e-11
mm10_ENSMUSG00000029304	mm10_Spp1	-8.17	6e-165	4.00	3e-79	-0.24	6e-01	0.35	4e-01	-4.98	2e-07
mm10_ENSMUSG00000026475	mm10_Rgs16	-8.18	2e-69	0.39	3e-01	3.05	6e-27	1.64	5e-05	-4.32	1e-03
mm10_ENSMUSG00000031628	mm10_Casp3	-8.19	1e-94	2.87	5e-41	0.88	8e-04	1.12	1e-03	-4.33	8e-05
mm10_ENSMUSG00000028832	mm10_Stmn1	-8.20	2e-79	3.20	2e-33	0.76	2e-02	0.59	2e-01	-4.93	3e-04
mm10_ENSMUSG00000006378	mm10_Gcat	-8.20	6e-84	3.02	1e-37	0.77	9e-03	1.00	9e-03	-4.35	3e-04
mm10_ENSMUSG00000031673	mm10_Cdh11	-8.21	4e-178	0.97	2e-06	2.62	2e-40	1.56	3e-08	-6.53	2e-10
mm10_ENSMUSG00000024640	mm10_Psat1	-8.25	2e-87	4.62	2e-81	-0.76	4e-02	-0.19	1e+00	-4.40	1e-04
mm10_ENSMUSG00000061024	mm10_Rrs1	-8.31	1e-97	3.36	5e-55	0.65	2e-02	0.42	3e-01	-3.46	4e-04
mm10_ENSMUSG00000035783	mm10_Acta2	-8.31	3e-189	4.23	2e-91	-0.62	8e-02	0.35	4e-01	-5.78	2e-09
mm10_ENSMUSG00000101939	mm10_Gm28438	-8.35	7e-251	1.61	1e-15	1.62	9e-14	2.12	2e-14	-8.34	2e-16
mm10_ENSMUSG00000029430	mm10_Ran	-8.38	9e-240	3.10	2e-70	0.87	5e-05	0.58	6e-02	-7.85	4e-15
mm10_ENSMUSG00000040204	mm10_Pclaf	-8.40	2e-31	7.84	9e-45	-5.46	1e-06	-1.98	2e-01	-3.54	2e-01
mm10_ENSMUSG00000087365	mm10_C430049B03Rik	-8.44	1e-99	1.40	7e-10	1.95	2e-16	2.01	5e-11	-4.59	4e-05
mm10_ENSMUSG00000032014	mm10_Oaf	-8.45	3e-147	3.11	7e-56	0.82	7e-04	0.68	5e-02	-4.92	2e-07
mm10_ENSMUSG00000011179	mm10_Odc1	-8.49	1e-107	3.19	9e-46	0.82	3e-03	0.51	2e-01	-5.23	8e-06
mm10_ENSMUSG00000053398	mm10_Phgdh	-8.55	5e-161	3.46	4e-75	0.56	2e-02	0.32	4e-01	-4.44	2e-07
mm10_ENSMUSG00000024359	mm10_Hspa9	-8.55	7e-184	3.06	8e-63	0.85	1e-04	0.74	2e-02	-6.51	1e-10
mm10_ENSMUSG00000064043	mm10_Trerf1	-8.56	1e-111	1.24	9e-09	2.12	5e-22	1.98	6e-12	-4.71	7e-06
mm10_ENSMUSG00000062070	mm10_Pgk1	-8.64	4e-198	3.00	4e-62	0.72	1e-03	1.06	2e-04	-4.78	3e-09
mm10_ENSMUSG00000064337	mm10_mt-Rnr1	-8.66	7e-193	1.66	1e-13	1.43	8e-09	2.28	1e-13	-8.45	3e-12
mm10_ENSMUSG00000027533	mm10_Fabp5	-8.67	8e-202	3.08	4e-63	0.92	4e-05	0.57	8e-02	-6.14	5e-11
mm10_ENSMUSG00000054717	mm10_Hmgb2	-8.68	8e-130	2.96	3e-43	0.76	4e-03	1.11	1e-03	-5.83	3e-07
mm10_ENSMUSG00000076617	mm10_Ighm	-8.75	1e-63	-0.37	4e-01	3.60	1e-36	1.57	1e-04	-3.89	4e-03
mm10_ENSMUSG00000031548	mm10_Sfrp1	-8.77	1e-161	1.19	4e-08	2.72	4e-37	1.04	1e-03	-6.51	3e-09
mm10_ENSMUSG00000031490	mm10_Eif4ebp1	-8.84	6e-157	3.23	2e-63	0.59	2e-02	0.82	1e-02	-5.99	9e-09
mm10_ENSMUSG00000032085	mm10_Tagln	-8.94	3e-148	3.61	7e-62	0.29	3e-01	0.46	2e-01	-5.67	1e-07
mm10_ENSMUSG00000031403	mm10_Dkc1	-9.17	2e-75	3.11	2e-33	0.86	7e-03	0.68	1e-01	-4.32	9e-04
mm10_ENSMUSG00000052331	mm10_Ankrd44	-9.19	2e-90	1.03	3e-05	2.20	2e-19	2.14	1e-11	-4.33	2e-04
mm10_ENSMUSG00000031897	mm10_Psmb10	-9.28	6e-90	3.30	3e-46	0.67	2e-02	0.59	2e-01	-4.42	1e-04
mm10_ENSMUSG00000048930	mm10_Tada3	-9.30	5e-96	1.56	1e-11	1.85	2e-14	1.95	6e-10	-4.44	8e-05
mm10_ENSMUSG00000060510	mm10_Zfp266	-9.59	2e-115	1.23	1e-08	2.09	2e-21	2.05	6e-13	-4.74	7e-06

This plot shows the Sequencing Saturation metric as a function of downsampled sequencing depth in mean reads per cell, up to the observed sequencing depth. Sequencing Saturation is a measure of the observed library complexity, and approaches 1.0 (100%) when all converted mRNA transcripts have been sequenced. The slope of the curve near the endpoint can be interpreted as an upper bound to the benefit to be gained from increasing the sequencing depth beyond this point. The dotted line is drawn at a value reasonably approximating the saturation point.

Sequencing Saturation

This plot shows the Median Genes per Cell as a function of downsampled sequencing depth in mean reads per cell, up to the observed sequencing depth. The slope of the curve near the endpoint can be interpreted as an upper bound to the benefit to be gained from increasing the sequencing depth beyond this point.